Disease ⇒ HIV infection {40000212}

Record Keys
Type:	Disease
Parent:	[ ]
Definition:	HIV infection

Details
Initialisation date:	[ ]
Other Terms:	[ ]

Meta Information
MedDra ID:	10000807
MedDra Level:	pt
ICD:	[ ]
Category:	[ ]
Zone:	[ ]
Mechanism:	[ ]

Notes:

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Shared Reference Notes

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References Notes

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↥ Microbiota

‐ Achromobacter Cervicovaginal lavage Human [1.1]
‐ Acidaminococcus fermentans Stool Human [1.2]
‐ Acinetobacter Tissue biopsie Human [1.3]
‐ Allisonella histaminiformans Stool Human [1.2]
‐ Allisonella Stool Human [1.4]
‐ Anaerococcus Rectal lavage sample Human [1.5]
‐ Anaerococcus Rectal swab Human [1.6]
‐ Anaerotruncus Stool Human [1.7]
‐ Anaerovibrio Stool Human [1.4]
‐ Asaccharobacter Cervicovaginal lavage Human [1.1]
‐ Barnesiella Stool Human [1.8]
‐ Brachyspira Stool Human [1.9]
‐ Brucellaceae Tissue biopsie Human [1.3]
‐ Bulleidia Stool Human [1.2]
‐ Campylobacter Stool Human [1.9]
‐ Candida albicans Stool Human [1.10]
‐ Candida tropicalis Stool Human [1.10]
‐ Candida Oral wash Human [1.11]
‐ Capnocytophaga ochracea Palatine tonsil swab Human [1.12]
‐ Capnocytophaga Oral wash Human [1.11]
‐ Catenibacterium mitsuokai Stool Human [1.2]
‐ Catenibacterium Stool Human [1.9]
‐ Citrobacter Cervicovaginal lavage Human [1.1]
‐ Corynebacterium Rectal swab Human [1.13]
‐ Desulfovibrio piger Stool Human [1.2]
‐ Dialister propionicifaciens Stool Human [1.2]
‐ Dietzia Rectal swab Human [1.13]
‐ Eisenbergiella Stool Human [1.14]
‐ Enterobacteriaceae Stool Human [1.9]
‐ Enterobacter Stool Human [1.4]
‐ Erysipelotrichaceae Stool Human [1.8]
‐ Erysipelotrichaceae Tissue biopsie Human [1.15]
‐ Escherichia Stool Human [1.9]
‐ Escherichia Tissue biopsie Human [1.15]
‐ Eubacterium biforme Stool Human [1.2]
‐ Finegoldia Rectal swab Human [1.13]
‐ Firmicutes Stool Human [1.16]
‐ Fusobacteriaceae Stool Human [1.9]
‐ Fusobacterium Rectal lavage sample Human [1.5]
‐ Fusobacterium Rectal swab Human [1.17]
‐ Fusobacterium Stool Human [1.4]
‐ Gammaproteobacteria Stool Human [1.8]
‐ Gardnerella Rectal swab Human [1.17]
‐ Haemophilus parainfluenzae Saliva Human [1.18]
‐ Haemophilus Stool Human [1.19]
‐ Helicobacter Rectal swab Human [1.17]
‐ Howardella Stool Human [1.4]
‐ Klebsiella Tissue biopsie Human [1.15]
‐ Lactobacillus Rectal swab Human [1.17]
‐ Malassezia restricta Stool Human [1.10]
‐ Megasphaera elsdenii Stool Human [1.2]
‐ Mitsuokella jalaludinii Stool Human [1.2]
‐ Mogibacterium Stool Human [1.9]
‐ Murdochiella Rectal swab Human [1.13]
‐ Mycoplasma Cervicovaginal lavage Human [1.1]
‐ Nakaseomyces Stool Human [1.10]
‐ Negativicoccus Rectal swab Human [1.13]
‐ Neisseria cinerea Palatine tonsil swab Human [1.12]
‐ Oscillibacter Stool Human [1.14]
‐ Oscillospira Stool Human [1.7]
‐ Paraprevotella Stool Human [1.4]
‐ Pelomonas Oral wash Human [1.20]
‐ Peptoniphilus Rectal swab Human [1.13]
‐ Peptostreptococcus Rectal lavage sample Human [1.5]
‐ Porphyromonas Rectal lavage sample Human [1.5]
‐ Porphyromonas Rectal swab Human [1.13]
‐ Prevotella copri Stool Human [1.2]
‐ Prevotella melaninogenica Saliva Human [1.21]
‐ Prevotella stercorea Stool Human [1.2]
‐ Prevotella Rectal swab Human [1.13]
‐ Prevotella Stool Human [1.9]
‐ Prevotella Tissue biopsie Human [1.3]
‐ Propionibacteriaceae Cervicovaginal lavage Human [1.22]
‐ Propionibacterium Cervicovaginal lavage Human [1.1]
‐ Proteobacteria Stool Human [1.23]
‐ Pseudoflavonifractor Rectal swab Human [1.13]
‐ Pseudomonadales Plasma Human [1.24]
‐ Ralstonia Stool Human [1.9]
‐ Rothia mucilaginosa Saliva Human [1.21]
‐ Ruminococcus callidus Stool Human [1.2]
‐ Ruminococcus Stool Human [1.7]
‐ Salmonella Tissue biopsie Human [1.15]
‐ Selenomonas noxia Palatine tonsil swab Human [1.12]
‐ Serratia Tissue biopsie Human [1.15]
‐ Shigella Tissue biopsie Human [1.15]
‐ Sneathia Rectal swab Human [1.17]
‐ Stenotrophomonas Oral wash Human [1.20]
‐ Streptococcus Palatine tonsil swab Human [1.12]
‐ Streptococcus Rectal swab Human [1.13]
‐ Tropheryma whipplei Bronchoalveolar lavage Human [1.25]
‐ Veillonella Stool Human [1.19]
‐ Xanthomonadaceae Tissue biopsie Human [1.3]

↧ Microbiota

‐ Aggregatibacter Oral wash Human [1.11]
‐ Akkermansia Stool Human [1.9]
‐ Alistipes Rectal lavage sample Human [1.5]
‐ Alistipes Stool Human [1.2]
‐ Alistipes Tissue biopsie Human [1.3]
‐ Alternaria Stool Human [1.10]
‐ Anaerovibrio Stool Human [1.19]
‐ Arcanobacterium Rectal swab Human [1.13]
‐ Ascomycota Stool Human [1.10]
‐ Bacteroides Rectal swab Human [1.13]
‐ Bacteroides Stool Human [1.9]
‐ Bacteroides Tissue biopsie Human [1.3]
‐ Bacteroidetes Stool Human [1.16]
‐ Barnesiellaceae Stool Human [1.9]
‐ Barnesiella Rectal swab Human [1.13]
‐ Barnesiella Stool Human [1.4]
‐ Barnesiella Tissue biopsie Human [1.3]
‐ Bifidobacterium Stool Human [1.19]
‐ Bilophila Stool Human [1.23]
‐ Blastocystis Stool Human [1.26]
‐ Blautia Stool Human [1.9]
‐ Blautia Tissue biopsie Human [1.3]
‐ Brachyspira Rectal swab Human [1.13]
‐ Butyrivibrio Stool Human [1.14]
‐ Campylobacter Bronchial brush Human [1.27]
‐ Campylobacter Rectal swab Human [1.13]
‐ Campylobacter Tissue biopsie Human [1.15]
‐ Christensenellaceae Tissue biopsie Human [1.3]
‐ Clostridium Stool Human [1.19]
‐ Collinsella Stool Human [1.7]
‐ Coprococcus Rectal lavage sample Human [1.5]
‐ Coprococcus Stool Human [1.9]
‐ Coprococcus Tissue biopsie Human [1.3]
‐ Dialister Stool Human [1.9]
‐ Dorea Stool Human [1.9]
‐ Eggerthella Cervicovaginal lavage Human [1.1]
‐ Eggerthella Rectal swab Human [1.17]
‐ Eggerthella Stool Human [1.4]
‐ Enhydrobacter Oral wash Human [1.20]
‐ Enhydrobacter Rectal swab Human [1.17]
‐ Eubacterium Rectal lavage sample Human [1.5]
‐ Faecalibacterium Rectal swab Human [1.13]
‐ Faecalibacterium Stool Human [1.9]
‐ Flavonifractor Rectal swab Human [1.13]
‐ Fusobacterium Bronchial brush Human [1.27]
‐ Fusobacterium Palatine tonsil swab Human [1.12]
‐ Haemophilus Palatine tonsil swab Human [1.12]
‐ Helicobacter Rectal swab Human [1.13]
‐ Lachnobacterium Cervicovaginal lavage Human [1.1]
‐ Lachnospiraceae Tissue biopsie Human [1.3]
‐ Lachnospira Rectal lavage sample Human [1.5]
‐ Lachnospira Stool Human [1.9]
‐ Lactobacillus crispatus Cervicovaginal lavage Human [1.1]
‐ Lactobacillus iners Cervicovaginal lavage Human [1.28]
‐ Mobiluncus Cervicovaginal lavage Human [1.1]
‐ Mycoplasma Cervicovaginal lavage Human [1.1]
‐ Neisseria Palatine tonsil swab Human [1.12]
‐ Odoribacter Stool Human [1.9]
‐ Oscillospira Stool Human [1.9]
‐ Oxalobacter Rectal swab Human [1.13]
‐ Oxalobacter Stool Human [1.4]
‐ Parabacteroides Rectal swab Human [1.13]
‐ Parabacteroides Stool Human [1.2]
‐ Parasutterella Rectal swab Human [1.13]
‐ Parvimonas Oral wash Human [1.20]
‐ Penicillium brevicompactum Stool Human [1.10]
‐ Peptostreptococcaceae Stool Human [1.9]
‐ Pichia Stool Human [1.10]
‐ Prevotella Bronchial brush Human [1.27]
‐ Prevotella Stool Human [1.16]
‐ Propionibacterium Cervicovaginal lavage Human [1.1]
‐ Pseudomonas Tissue biopsie Human [1.15]
‐ Pyramidobacter Stool Human [1.7]
‐ Rikenellaceae Stool Human [1.9]
‐ Romboutsia Stool Human [1.14]
‐ Roseburia Rectal lavage sample Human [1.5]
‐ Roseburia Stool Human [1.9]
‐ Ruminococcaceae Stool Human [1.14]
‐ Ruminococcaceae Tissue biopsie Human [1.3]
‐ Ruminococcus Rectal lavage sample Human [1.5]
‐ Ruminococcus Stool Human [1.9]
‐ Shigella Rectal swab Human [1.13]
‐ Staphylococcus Tissue biopsie Human [1.15]
‐ Stemphylium Oral wash Human [1.20]
‐ Streptococcus mitis Saliva Human [1.18]
‐ Streptococcus Rectal swab Human [1.17]
‐ Succinivibrio Rectal swab Human [1.13]
‐ Thalassospira Tissue biopsie Human [1.3]
‐ Turicibacter Rectal swab Human [1.13]
‐ Veillonella parvula Palatine tonsil swab Human [1.12]
‐ Veillonella Bronchial brush Human [1.27]
‐ Verrucomicrobia Bronchial brush Human [1.27]
‐ Vivictivallis Rectal swab Human [1.13]

Impact by Microbiota

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↥ Metabolome

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↧ Metabolome

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Impact by Metabolome

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Related Factor

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Subclass

‐ HIV-infected pneumonia

References

[ ]

Author: MetaBiom
Identifier: 40000212
URL: https://www.metabiom.org/disease/112/hiv-infection
Keywords: Microbiome, Dysbiosis, Chronic

Common References

[1.1] Comparison of lower genital tract microbiota in HIV-infected and uninfected women from Rwanda and the US [2014] [PLOS ONE] [Journal] [80000650]
[1.2] Alterations in the gut microbiota associated with HIV-1 infection [2013] [Cell Host & Microbe] [Journal] [80000339]
[1.3] An altered intestinal mucosal microbiome in HIV-1 infection is associated with mucosal and systemic immune activation and endotoxemia. [2014] [Mucosal Immunology] [Journal] [80000343]
[1.4] Among older adults, age-related changes in the stool microbiome differ by HIV-1 serostatus [2019] [EBioMedicine] [Journal] [80000999]
[1.5] HIV infection is associated with compositional and functional shifts in the rectal mucosal microbiota [2013] [Microbiome] [Journal] [80000337]
[1.6] Composition of gut microbiota of children and adolescents with perinatal HIV infection taking antiretroviral therapy in Zimbabwe [2019] [Journal of Infectious Diseases] [Journal] [80001052]
[1.7] Altered gut microbiota and host metabolite profiles in women with human immunodeficiency virus [2020] [Clinical Infectious Diseases] [Journal] [80001298]
[1.8] Intestinal microbiota, microbial translocation, and systemic inflammation in chronic HIV infection. [2015] [The Journal of Infectious Diseases] [Journal] [80000342]
[1.9] A compositional look at the human gastrointestinal microbiome and immune activation parameters in HIV infected subjects. [2014] [PLOS ONE] [Journal] [80000332]
[1.10] Metabarcoding analysis of eukaryotic microbiota in the gut of HIV-infected patients [2018] [PLOS ONE] [Journal] [80000743]
[1.11] Oraly mycobiome analysis of HIV-infected patients: identification of Pichia as an antagonist of opportunistic Fungi [2014] [PLOS ONE] [Journal] [80001216]
[1.12] The palatine tonsil bacteriome, but not the mycobiome, is altered in HIV infection [2018] [BMC Microbiology] [Journal] [80001098]
[1.13] Effects of HIV viremia on the gastrointestinal microbiome of young MSM [2019] [AIDS] [Journal] [80000959]
[1.14] Impact of human immunodeficiency virus-related gut microbiota alterations on metabolic comorbid conditions [2020] [Clinical Infectious Diseases] [Journal] [80001357]
[1.15] Dysbiosis of the gut microbiota is associated with HIV disease progression and tryptophan catabolism [2013] [Science translational medicine] [Journal] [80000345]
[1.16] Alterations in the Fecal Microbiota of Patients with HIV-1 Infection: An Observational Study in A Chinese Population [2016] [Scientific Reports] [Journal] [80000387]
[1.17] Altered immunity and microbial dysbiosis in aged individuals with long-term controlled HIV infection [2019] [Frontiers in Immunology] [Journal] [80000974]
[1.18] The oral microbiome in human immunodeficiency virus (HIV)-positive individuals [2015] [Journal of Medical Microbiology] [Journal] [80000483]
[1.19] Evolution of the gut microbiome following acute HIV-1 infection [2019] [Microbiome] [Journal] [80001103]
[1.20] Dysbiosis in the oral bacterial and fungal microbiome of HIV-infected subjects is associated with clinical and immunologic variables of HIV infection [2018] [PLOS ONE] [Journal] [80000883]
[1.21] Oral microbiome in HIV-infected women: shifts in the abundance of pathogenic and beneficial bacteria are associated with aging, HIV load, CD4 count, and antiretroviral therapy [2019] [AIDS Research and Human Retroviruses] [Journal] [80000982]
[1.22] Comparison of the diversity of the vaginal microbiota in HIV-infected and uninfected women with and without bacterial vaginosis. [2008] [The Journal of Infectious Diseases] [Journal] [80000370]
[1.23] Fecal bacterial microbiome diversity in chronic HIV-infected patients in China. [2016] [Emerging microbes & infections] [Journal] [80000435]
[1.24] Detection and identification of plasma bacterial and viral elements in HIV/AIDS patients in comparison to healthy adults [2012] [Infectious Diseases] [Journal] [80000340]
[1.25] Widespread colonization of the lung by Tropheryma whipplei in HIV infection [2013] [American Journal of Respiratory and Critical Care Medicine] [Journal] [80000351]
[1.26] Lower prevalence of Blastocystis sp. infections in HIV positive compared to HIV negative adults in Ghana [2019] [PLOS ONE] [Journal] [80001212]
[1.27] Decreased microbiome diversity in the HIV small airway epithelium [2018] [Respiratory Research] [Journal] [80000817]
[1.28] Pyrosequencing of the genital microbiotas of HIV-seropositive and -seronegative women reveals Lactobacillus iners as the predominant Lactobacillus species. [2011] [Applied and Environmental Microbiology] [Journal] [80000374]

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Disease ⇒ HIV infection {40000212}

Record Keys

Details

Meta Information

Notes:

Shared Reference Notes

References Notes

Common References